All sessions will take place in the Pharmaceutical Sciences Building at 2405 Wesbrook Mall. Please click on each session title to get detailed information for that course: abstract, prerequisites, software requirements (if any). Note that we can swap rooms without an email notice based on the latest projected attendance, so please check this program before coming to class.

We are planning to broadcast most of the sessions in both streams. To watch one of the live streams, if you are not able to attend in person, please go to this page during the sessions, starting at 9am Pacific on Monday morning. To ask questions remotely, please use and paste the event code HPC1 (Stream 1) or HPC2 (Stream 2).

date and time PHRM 1101 PHRM 1201
Mon 24th morning 9:00am-12:00pm Bash Scripting and Tools by Alex Razoumov beginner Next-Gen Sequencing by Phillip Richmond and Oriol Fornés beginner intermediate expert
Mon 24th afternoon 1:00pm-4:00pm Compute Canada cloud by Venkat Mahadevan beginner Jupyter Notebooks by Ian Allison (PIMS) beginner
Tue 25th morning 9:00am-12:00pm Introduction to HPC (part 1) by Alex Razoumov beginner Introduction to databases on Cedar by Wolfgang Richter beginner
Tue 25th afternoon 1:00pm-4:00pm Introduction to HPC (part 2) by Alex Razoumov beginner • 1pm-2:15pm Data privacy and REDCap platform by Michael Tang
• 2:30pm-4pm Best practices in data security by Scott Baker
Wed 26th morning 9:00am-12:00pm Scientific Visualization (part 1) by Alex Razoumov beginner Practical Applications of Deep Learning with MATLAB by Reece Teramoto beginner
Wed 26th afternoon 1:00pm-4:00pm Scientific Visualization (part 2) by Alex Razoumov beginner MATLAB Parallel Computing by Sam Marshalik beginner
Thu 27th morning 9:00am-12:00pm Chapel parallel programming by Alex Razoumov beginnerintermediate Tensor flow and machine learning by Griffin Lacey beginner
Thu 27th afternoon 1:00pm-4:00pm Building a bioinformatics pipeline with SnakeMake by Brian McConeghy intermediate HPC on Amazon Web Services by Kevin Jorissen
Thu 27th 4pm-5pm Open Panel on Career options, Academia and HPC